Package org.jmol.shapebio
Class Backbone
- java.lang.Object
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- org.jmol.shape.Shape
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- org.jmol.shapebio.BioShapeCollection
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- org.jmol.shapebio.Backbone
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public class Backbone extends BioShapeCollection
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Field Summary
Fields Modifier and Type Field Description (package private) javajs.util.BS
bsSelected
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Fields inherited from class org.jmol.shapebio.BioShapeCollection
atoms, bioShapes, isActive, madDnaRna, madHelixSheet, madOn, madTurnRandom
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Fields inherited from class org.jmol.shape.Shape
bsColixSet, bsSizeSet, isBioShape, ms, myType, RADIUS_MAX, shapeID, translucentAllowed, translucentLevel, vf, vwr
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Constructor Summary
Constructors Constructor Description Backbone()
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Method Summary
All Methods Instance Methods Concrete Methods Modifier and Type Method Description void
addDisplayedBackbone(Atom a, boolean isVisible)
void
initShape()
void
setAtomClickability()
void
setProperty(java.lang.String propertyName, java.lang.Object value, javajs.util.BS bsSelected)
void
setShapeSizeRD(int size, RadiusData rd, javajs.util.BS bsSelected)
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Methods inherited from class org.jmol.shapebio.BioShapeCollection
findNearestAtomIndex, getBioShape, getMpsShapeCount, getShapeState, getSizeG, initialize, initModelSet, replaceGroup, setModelVisibilityFlags, setPropBSC
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Methods inherited from class org.jmol.shape.Shape
appendCmd, checkBoundsMinMax, checkObjectClicked, checkObjectDragged, checkObjectHovered, coordinateInRange, encodeColor, getColix, getColixA, getColixB, getColixI, getColorCommand, getColorCommandUnk, getFontCommand, getIndexFromName, getProperty, getPropertyData, getPropShape, getShapeDetail, getSize, getTranslucentLabel, initializeShape, setModelSet, setPropS, setSize, setSizeRD, wasClicked
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Method Detail
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initShape
public void initShape()
- Overrides:
initShape
in classBioShapeCollection
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setProperty
public void setProperty(java.lang.String propertyName, java.lang.Object value, javajs.util.BS bsSelected)
- Overrides:
setProperty
in classBioShapeCollection
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setShapeSizeRD
public void setShapeSizeRD(int size, RadiusData rd, javajs.util.BS bsSelected)
- Overrides:
setShapeSizeRD
in classBioShapeCollection
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addDisplayedBackbone
public void addDisplayedBackbone(Atom a, boolean isVisible)
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setAtomClickability
public void setAtomClickability()
- Overrides:
setAtomClickability
in classBioShapeCollection
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